dgit.raspbian.org Git - ncbi-blast+.git/commit

author	Aaron M. Ucko <ucko@debian.org>
	Sun, 20 Sep 2020 00:57:21 +0000 (20:57 -0400)
committer	Aaron M. Ucko <ucko@debian.org>
	Sun, 20 Sep 2020 00:57:21 +0000 (20:57 -0400)
commit	0afa5b015ea8ee9024654442736912b8c99cc325
tree	3859d8ea20c02f051059d995a760ad992bfec4e5	tree \| snapshot
parent	3267542fe5a4acac4d0eef647326996ec987db79	commit \| diff

New upstream version 2.10.1

1180 files changed:

c++/compilers/unix/ICC.sh		diff \| blob \| history
c++/compilers/vs2015/protoc.bat		diff \| blob \| history
c++/compilers/vs2017/check.sh		diff \| blob \| history
c++/compilers/vs2017/protoc.bat		diff \| blob \| history
c++/compilers/xcode30_prj/copybin.sh		diff \| blob \| history
c++/compilers/xcode30_prj/datatool.sh		diff \| blob \| history
c++/compilers/xcode30_prj/protoc.sh		diff \| blob \| history
c++/include/algo/blast/api/blast_seqinfosrc_aux.hpp		diff \| blob \| history
c++/include/algo/blast/api/version.hpp		diff \| blob \| history
c++/include/algo/blast/blastinput/blast_args.hpp		diff \| blob \| history
c++/include/algo/blast/blastinput/blast_input_aux.hpp		diff \| blob \| history
c++/include/algo/blast/blastinput/cmdline_flags.hpp		diff \| blob \| history
c++/include/algo/blast/blastinput/magicblast_args.hpp		diff \| blob \| history
c++/include/algo/blast/core/blast_hits.h		diff \| blob \| history
c++/include/algo/blast/core/blast_hspstream.h		diff \| blob \| history
c++/include/algo/blast/core/blast_seqsrc.h		diff \| blob \| history
c++/include/algo/blast/core/blast_traceback.h		diff \| blob \| history
c++/include/algo/blast/igblast/igblast.hpp		diff \| blob \| history
c++/include/algo/winmask/seq_masker_istat.hpp		diff \| blob \| history
c++/include/cgi/cgi_exception.hpp		diff \| blob \| history
c++/include/cgi/cgiapp.hpp		diff \| blob \| history
c++/include/cgi/ncbicgi.hpp		diff \| blob \| history
c++/include/cgi/user_agent.hpp		diff \| blob \| history
c++/include/common/config/ncbiconf_msvc.h		diff \| blob \| history
c++/include/common/config/ncbiconf_xcode.h		diff \| blob \| history
c++/include/common/ncbi_build_ver.h.in		diff \| blob \| history
c++/include/common/ncbi_export.h		diff \| blob \| history
c++/include/common/ncbi_package_ver.h		diff \| blob \| history
c++/include/common/ncbi_revision.h.in		diff \| blob \| history
c++/include/common/ncbi_source_ver.h		diff \| blob \| history
c++/include/common/ncbiconf_impl.h		diff \| blob \| history
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c++/include/connect/ncbi_conn_stream.hpp		diff \| blob \| history
c++/include/connect/ncbi_connection.h		diff \| blob \| history
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c++/include/connect/ncbi_core_cxx.hpp		diff \| blob \| history
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c++/include/connect/ncbi_localip.hpp	[new file with mode: 0644]	blob
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c++/include/connect/ncbi_usage_report.hpp	[new file with mode: 0644]	blob
c++/include/connect/ncbi_util.h		diff \| blob \| history
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c++/include/corelib/error_codes.hpp		diff \| blob \| history
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c++/include/corelib/impl/ncbi_atomic_defs.h		diff \| blob \| history
c++/include/corelib/impl/ncbi_param_impl.hpp		diff \| blob \| history
c++/include/corelib/ncbi_fast.hpp		diff \| blob \| history
c++/include/corelib/ncbi_limits.hpp		diff \| blob \| history
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c++/include/corelib/ncbi_os_unix.hpp		diff \| blob \| history
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c++/include/corelib/ncbi_process.hpp		diff \| blob \| history
c++/include/corelib/ncbi_system.hpp		diff \| blob \| history
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c++/include/corelib/ncbi_xstr.hpp		diff \| blob \| history
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c++/include/ncbi_pch.hpp		diff \| blob \| history
c++/include/ncbi_source_ver.h		diff \| blob \| history
c++/include/ncbiconf.h		diff \| blob \| history
c++/include/objects/dbsnp/primary_track/impl/snpptis_impl.hpp	[new file with mode: 0644]	blob
c++/include/objects/dbsnp/primary_track/snpptis.hpp	[new file with mode: 0644]	blob
c++/include/objects/entrezgene/Entrezgene.hpp	[new file with mode: 0644]	blob
c++/include/objects/general/Object_id.hpp		diff \| blob \| history
c++/include/objects/genomecoll/genomic_collections_cli.hpp		diff \| blob \| history
c++/include/objects/macro/Suspect_rule_set.hpp		diff \| blob \| history
c++/include/objects/seq/seq_id_handle.hpp		diff \| blob \| history
c++/include/objects/seqalign/Seq_align.hpp		diff \| blob \| history
c++/include/objects/seqfeat/SeqFeatData.hpp		diff \| blob \| history
c++/include/objects/seqfeat/SubSource.hpp		diff \| blob \| history
c++/include/objects/seqloc/PDB_seq_id.hpp		diff \| blob \| history
c++/include/objects/seqloc/Seq_id.hpp		diff \| blob \| history
c++/include/objects/taxon1/local_taxon.hpp		diff \| blob \| history
c++/include/objects/trackmgr/gridrpcclient.hpp		diff \| blob \| history
c++/include/objects/valerr/ValidErrItem.hpp		diff \| blob \| history
c++/include/objmgr/annot_selector.hpp		diff \| blob \| history
c++/include/objmgr/annot_type_selector.hpp		diff \| blob \| history
c++/include/objmgr/annot_types_ci.hpp		diff \| blob \| history
c++/include/objmgr/data_loader.hpp		diff \| blob \| history
c++/include/objmgr/impl/annot_collector.hpp		diff \| blob \| history
c++/include/objmgr/impl/bioseq_info.hpp		diff \| blob \| history
c++/include/objmgr/impl/scope_impl.hpp		diff \| blob \| history
c++/include/objmgr/impl/scope_info.hpp		diff \| blob \| history
c++/include/objmgr/impl/seq_annot_info.hpp		diff \| blob \| history
c++/include/objmgr/impl/seq_entry_info.hpp		diff \| blob \| history
c++/include/objmgr/impl/seq_vector_cvt.hpp		diff \| blob \| history
c++/include/objmgr/impl/tse_info.hpp		diff \| blob \| history
c++/include/objmgr/object_manager.hpp		diff \| blob \| history
c++/include/objmgr/seq_loc_mapper.hpp		diff \| blob \| history
c++/include/objmgr/split/id_range.hpp		diff \| blob \| history
c++/include/objmgr/split/object_splitinfo.hpp		diff \| blob \| history
c++/include/objmgr/split/size.hpp		diff \| blob \| history
c++/include/objmgr/tse_handle.hpp		diff \| blob \| history
c++/include/objmgr/util/autodef_feature_clause.hpp		diff \| blob \| history
c++/include/objmgr/util/autodef_feature_clause_base.hpp		diff \| blob \| history
c++/include/objmgr/util/feature.hpp		diff \| blob \| history
c++/include/objmgr/util/indexer.hpp		diff \| blob \| history
c++/include/objmgr/util/sequence.hpp		diff \| blob \| history
c++/include/objtools/align_format/align_format_util.hpp		diff \| blob \| history
c++/include/objtools/align_format/seqalignfilter.hpp		diff \| blob \| history
c++/include/objtools/align_format/showalign.hpp		diff \| blob \| history
c++/include/objtools/align_format/showdefline.hpp		diff \| blob \| history
c++/include/objtools/align_format/tabular.hpp		diff \| blob \| history
c++/include/objtools/alnmgr/aln_container.hpp		diff \| blob \| history
c++/include/objtools/alnmgr/aln_converters.hpp		diff \| blob \| history
c++/include/objtools/alnmgr/aln_rng_coll_list_oper.hpp	[new file with mode: 0644]	blob
c++/include/objtools/alnmgr/aln_rng_coll_oper.hpp		diff \| blob \| history
c++/include/objtools/alnmgr/alnmap.hpp		diff \| blob \| history
c++/include/objtools/alnmgr/alnsegments.hpp		diff \| blob \| history
c++/include/objtools/alnmgr/pairwise_aln.hpp		diff \| blob \| history
c++/include/objtools/blast/blastdb_format/blastdb_dataextract.hpp		diff \| blob \| history
c++/include/objtools/blast/seqdb_reader/impl/seqdbatlas.hpp		diff \| blob \| history
c++/include/objtools/blast/seqdb_reader/impl/seqdbvol.hpp		diff \| blob \| history
c++/include/objtools/blast/seqdb_reader/seqdb.hpp		diff \| blob \| history
c++/include/objtools/blast/seqdb_reader/seqdbcommon.hpp		diff \| blob \| history
c++/include/objtools/cleanup/cleanup.hpp		diff \| blob \| history
c++/include/objtools/cleanup/fix_feature_id.hpp		diff \| blob \| history
c++/include/objtools/data_loaders/genbank/gbloader.hpp		diff \| blob \| history
c++/include/objtools/data_loaders/genbank/gbnative.hpp		diff \| blob \| history
c++/include/objtools/data_loaders/genbank/impl/psg_loader_impl.hpp		diff \| blob \| history
c++/include/objtools/data_loaders/genbank/psg_loader.hpp		diff \| blob \| history
c++/include/objtools/edit/cds_fix.hpp		diff \| blob \| history
c++/include/objtools/edit/feattable_edit.hpp		diff \| blob \| history
c++/include/objtools/edit/gaps_edit.hpp		diff \| blob \| history
c++/include/objtools/edit/seq_entry_edit.hpp		diff \| blob \| history
c++/include/objtools/format/context.hpp		diff \| blob \| history
c++/include/objtools/format/embl_formatter.hpp		diff \| blob \| history
c++/include/objtools/format/flat_file_config.hpp		diff \| blob \| history
c++/include/objtools/format/flat_file_generator.hpp		diff \| blob \| history
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c++/include/objtools/pubseq_gateway/client/impl/misc.hpp	[new file with mode: 0644]	blob
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